Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium sp. YBL2 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingobium sp. YBL2 plasmid 6pYBL2-6, complete sequence.
Gene Summary
Adenine Count
3785 bp
Thymine Count
3786 bp
Guanine Count
5834 bp
Cytosine Count
5934 bp
Genome Length
19339 bp
Protein-coding Genes
16 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
7
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| had family hydrolase | TZ53_RS04775 | Not Available | Positive | 996570 - 997244 | 25361.1 |
| 2-hydroxyacid dehydrogenase | TZ53_RS04780 | Not Available | Negative | 997302 - 998234 | 32881.9 |
| cystathionine gamma-synthase family protein | TZ53_RS04785 | Not Available | Negative | 998231 - 999556 | 47497.0 |
| ligase-associated dna damage response dexh box helicase | TZ53_RS04790 | Not Available | Positive | 999780 - 1002191 | 88849.9 |
| inorganic diphosphatase | TZ53_RS04795 | Not Available | Negative | 1002371 - 1002913 | 19817.7 |
| m61 family metallopeptidase | TZ53_RS04800 | Not Available | Negative | 1002957 - 1004876 | 70750.8 |
| histidine--trna ligase | TZ53_RS04805 | Not Available | Positive | 1005029 - 1006291 | 45884.4 |
| peptide chain release factor 1 | TZ53_RS04810 | Not Available | Positive | 1006288 - 1007382 | 40022.5 |
| peptide chain release factor n(5)-glutamine methyltransferase | TZ53_RS04815 | Not Available | Positive | 1007501 - 1008328 | 29521.5 |
| duf4167 domain-containing protein | TZ53_RS04820 | Not Available | Positive | 1008647 - 1009450 | 30347.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
