Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium sp. YBL2 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingobium sp. YBL2 plasmid 6pYBL2-6, complete sequence.
Gene Summary
Adenine Count
3785 bp
Thymine Count
3786 bp
Guanine Count
5834 bp
Cytosine Count
5934 bp
Genome Length
19339 bp
Protein-coding Genes
16 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
7
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna polymerase iii subunit delta | TZ53_RS04675 | Not Available | Positive | 973944 - 974969 | 36734.2 |
| peptide-methionine (r)-s-oxide reductase msrb | TZ53_RS04680 | Not Available | Positive | 975068 - 975472 | 14859.0 |
| transglycosylase domain-containing protein | TZ53_RS04685 | Not Available | Positive | 975629 - 977704 | 74511.3 |
| aspartyl protease family protein | TZ53_RS04690 | Not Available | Negative | 977917 - 978873 | 34417.2 |
| transcription termination factor rho | TZ53_RS04695 | Not Available | Positive | 979130 - 980386 | 46393.1 |
| yjbe family putative metal transport protein | TZ53_RS04700 | Not Available | Positive | 980521 - 981240 | 24949.3 |
| phytanoyl-coa dioxygenase family protein | TZ53_RS04705 | Not Available | Negative | 981367 - 982386 | 38027.6 |
| quinone oxidoreductase | TZ53_RS04710 | Not Available | Negative | 982530 - 983498 | 33683.4 |
| dienelactone hydrolase family protein | TZ53_RS04715 | Not Available | Negative | 983514 - 984212 | 25191.9 |
| duf6489 family protein | TZ53_RS04720 | Not Available | Positive | 984371 - 984631 | 9295.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
