Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium sp. YBL2 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingobium sp. YBL2 plasmid 6pYBL2-6, complete sequence.
Gene Summary
Adenine Count
3785 bp
Thymine Count
3786 bp
Guanine Count
5834 bp
Cytosine Count
5934 bp
Genome Length
19339 bp
Protein-coding Genes
16 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
7
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ycze/yyas/yitt family protein | TZ53_RS04625 | Not Available | Positive | 963393 - 963995 | 21459.1 |
| duf1993 family protein | TZ53_RS04630 | Not Available | Positive | 964116 - 964622 | 18231.9 |
| hypothetical protein | TZ53_RS04635 | Not Available | Negative | 964770 - 965252 | 16565.9 |
| dna topoisomerase (atp-hydrolyzing) subunit b | TZ53_RS04640 | Not Available | Positive | 965339 - 967846 | 92508.7 |
| dna-3-methyladenine glycosylase i | TZ53_RS04645 | Not Available | Positive | 967851 - 968414 | 21266.4 |
| cog3650 family protein | TZ53_RS04650 | Not Available | Positive | 968423 - 968929 | 17275.1 |
| hypothetical protein | TZ53_RS04655 | Not Available | Negative | 969258 - 969989 | 26124.2 |
| duf3576 domain-containing protein | TZ53_RS04660 | Not Available | Positive | 970219 - 970668 | 15989.5 |
| leucine--trna ligase | TZ53_RS04665 | Not Available | Positive | 970783 - 973353 | 95208.5 |
| lps assembly lipoprotein lpte | TZ53_RS04670 | Not Available | Positive | 973453 - 973947 | 17353.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
