Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium sp. YBL2 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingobium sp. YBL2 plasmid 6pYBL2-6, complete sequence.
Gene Summary
Adenine Count
3785 bp
Thymine Count
3786 bp
Guanine Count
5834 bp
Cytosine Count
5934 bp
Genome Length
19339 bp
Protein-coding Genes
16 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
7
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sco family protein | TZ53_RS04575 | Not Available | Positive | 953801 - 954457 | 23241.7 |
| ycgn family cysteine cluster protein | TZ53_RS04580 | Not Available | Positive | 954461 - 954886 | 16444.4 |
| m48 family metallopeptidase | TZ53_RS04585 | Not Available | Positive | 954867 - 955577 | 26292.8 |
| hypothetical protein | TZ53_RS04590 | Not Available | Positive | 955585 - 955848 | 10032.1 |
| rhodanese-related sulfurtransferase | TZ53_RS04595 | Not Available | Negative | 955897 - 956745 | 30449.9 |
| ligase-associated dna damage response endonuclease pdem | TZ53_RS04600 | Not Available | Positive | 956799 - 957458 | 23822.7 |
| tonb-dependent receptor | TZ53_RS04605 | Not Available | Positive | 957647 - 960412 | 97415.4 |
| yggs family pyridoxal phosphate-dependent enzyme | TZ53_RS04610 | Not Available | Negative | 960390 - 961136 | 26385.9 |
| thiamine phosphate synthase | TZ53_RS04615 | Not Available | Positive | 961154 - 961717 | 20473.4 |
| plp-dependent aminotransferase family protein | TZ53_RS04620 | Not Available | Negative | 961840 - 963303 | 52495.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
