Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium sp. YBL2 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingobium sp. YBL2 plasmid 6pYBL2-6, complete sequence.
Gene Summary
Adenine Count
3785 bp
Thymine Count
3786 bp
Guanine Count
5834 bp
Cytosine Count
5934 bp
Genome Length
19339 bp
Protein-coding Genes
16 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
7
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| flavodoxin-dependent (e)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase | TZ53_RS04475 | Not Available | Negative | 937395 - 938555 | 41049.2 |
| ompp1/fadl family transporter | TZ53_RS04480 | Not Available | Negative | 938736 - 940040 | 46035.4 |
| phosphoglucomutase/phosphomannomutase pgmg | TZ53_RS04485 | Not Available | Negative | 940437 - 941858 | 50703.3 |
| j domain-containing protein | TZ53_RS04490 | Not Available | Negative | 941879 - 942316 | 14987.6 |
| division plane positioning atpase mipz | TZ53_RS04495 | Not Available | Negative | 942316 - 943122 | 29680.6 |
| pantoate--beta-alanine ligase | TZ53_RS04500 | Not Available | Positive | 943232 - 944077 | 30231.5 |
| copd family protein | TZ53_RS04505 | Not Available | Negative | 944116 - 944556 | 16759.3 |
| uroporphyrinogen decarboxylase | TZ53_RS04510 | Not Available | Negative | 944571 - 945632 | 38026.7 |
| pyruvate, water dikinase regulatory protein | TZ53_RS04515 | Not Available | Positive | 945920 - 946741 | 30582.7 |
| maf family protein | TZ53_RS04520 | Not Available | Positive | 946746 - 947339 | 21449.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
