Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium sp. YBL2 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingobium sp. YBL2 plasmid 6pYBL2-6, complete sequence.
Gene Summary
Adenine Count
3785 bp
Thymine Count
3786 bp
Guanine Count
5834 bp
Cytosine Count
5934 bp
Genome Length
19339 bp
Protein-coding Genes
16 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
7
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sigma factor-like helix-turn-helix dna-binding protein | TZ53_RS04280 | Not Available | Positive | 895471 - 895716 | 9578.79 |
| nucleotidyltransferase domain-containing protein | TZ53_RS04285 | Not Available | Positive | 895791 - 896594 | 31252.1 |
| hypothetical protein | TZ53_RS04290 | Not Available | Negative | 896589 - 897173 | 21738.8 |
| tyrosine-type recombinase/integrase | TZ53_RS04295 | Not Available | Negative | 897441 - 898442 | 37131.5 |
| tyrosine-type recombinase/integrase | TZ53_RS04300 | Not Available | Negative | 898439 - 899362 | 35274.8 |
| site-specific integrase | TZ53_RS04305 | Not Available | Negative | 899359 - 900600 | 45947.7 |
| hypothetical protein | TZ53_RS04310 | Not Available | Positive | 900749 - 900988 | 9462.34 |
| duf2185 domain-containing protein | TZ53_RS25535 | Not Available | Positive | 901038 - 902075 | 38547.3 |
| hypothetical protein | TZ53_RS04320 | Not Available | Negative | 902136 - 902498 | 12864.4 |
| relaxase/mobilization nuclease rlxs | TZ53_RS04325 | Not Available | Positive | 902775 - 904829 | 76603.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
