Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium sp. YBL2 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingobium sp. YBL2 plasmid 6pYBL2-6, complete sequence.
Gene Summary
Adenine Count
3785 bp
Thymine Count
3786 bp
Guanine Count
5834 bp
Cytosine Count
5934 bp
Genome Length
19339 bp
Protein-coding Genes
16 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
7
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rna repair transcriptional activator rtcr | TZ53_RS04235 | Not Available | Positive | 884732 - 886324 | 58802.8 |
| spfh domain-containing protein | TZ53_RS04240 | Not Available | Positive | 886393 - 887385 | 35147.1 |
| duf4178 domain-containing protein | TZ53_RS04245 | Not Available | Positive | 887432 - 888061 | 23106.9 |
| duf4178 domain-containing protein | TZ53_RS04250 | Not Available | Positive | 888054 - 889397 | 49726.9 |
| hypothetical protein | TZ53_RS27095 | Not Available | Positive | 889408 - 889554 | 5021.03 |
| duf350 domain-containing protein | TZ53_RS04255 | Not Available | Positive | 889564 - 889776 | 7299.32 |
| polyamine aminopropyltransferase | TZ53_RS04260 | Not Available | Positive | 889769 - 891307 | 56714.5 |
| fad-dependent oxidoreductase | TZ53_RS04265 | Not Available | Positive | 891297 - 892907 | 58422.2 |
| adenosylmethionine decarboxylase | TZ53_RS04270 | Not Available | Positive | 892904 - 893269 | 13057.7 |
| parb n-terminal domain-containing protein | TZ53_RS04275 | Not Available | Positive | 893636 - 895408 | 64195.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
