Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium sp. YBL2 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingobium sp. YBL2 plasmid 6pYBL2-6, complete sequence.
Gene Summary
Adenine Count
3785 bp
Thymine Count
3786 bp
Guanine Count
5834 bp
Cytosine Count
5934 bp
Genome Length
19339 bp
Protein-coding Genes
16 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
7
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| enoyl-coa hydratase/isomerase family protein | TZ53_RS04185 | Not Available | Positive | 871355 - 872152 | 29066.1 |
| ethd family reductase | TZ53_RS04190 | Not Available | Positive | 872156 - 872494 | 12166.2 |
| sdr family nad(p)-dependent oxidoreductase | TZ53_RS04195 | Not Available | Positive | 872487 - 873281 | 27157.5 |
| class i adenylate-forming enzyme family protein | TZ53_RS04200 | Not Available | Positive | 873259 - 874800 | 54699.4 |
| 3-hydroxyacyl-coa dehydrogenase nad-binding domain-containing protein | TZ53_RS04205 | Not Available | Positive | 874802 - 876871 | 72890.1 |
| nadp-dependent oxidoreductase | TZ53_RS04210 | Not Available | Positive | 876868 - 877884 | 36561.7 |
| ompa family protein | TZ53_RS04215 | Not Available | Negative | 877955 - 878818 | 30084.7 |
| rna 3'-terminal phosphate cyclase | TZ53_RS04220 | Not Available | Negative | 879551 - 880564 | 36114.9 |
| rtcb family protein | TZ53_RS04225 | Not Available | Negative | 881036 - 882265 | 44877.0 |
| vwa domain-containing protein | TZ53_RS04230 | Not Available | Negative | 882894 - 884453 | 55651.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
