Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium sp. YBL2 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingobium sp. YBL2 plasmid 6pYBL2-6, complete sequence.
Gene Summary
Adenine Count
3785 bp
Thymine Count
3786 bp
Guanine Count
5834 bp
Cytosine Count
5934 bp
Genome Length
19339 bp
Protein-coding Genes
16 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
7
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| atp-dependent nuclease | TZ53_RS03885 | Not Available | Negative | 808426 - 810465 | 74111.5 |
| hypothetical protein | TZ53_RS03890 | Not Available | Negative | 810532 - 810822 | 10578.5 |
| class i sam-dependent dna methyltransferase | TZ53_RS03895 | Not Available | Positive | 811343 - 814153 | 103952.0 |
| is256 family transposase | TZ53_RS25925 | Not Available | Negative | 814066 - 815277 | 45105.6 |
| hypothetical protein | TZ53_RS03905 | Not Available | Positive | 815560 - 816237 | 24595.3 |
| duf5655 domain-containing protein | TZ53_RS03910 | Not Available | Positive | 816234 - 817145 | 33696.3 |
| is3 family transposase | TZ53_RS03920 | Not Available | Negative | 817952 - 819180 | 46604.1 |
| is21 family transposase | TZ53_RS03930 | Not Available | Positive | 819417 - 820940 | 58350.3 |
| is21-like element helper atpase istb | TZ53_RS03935 | Not Available | Positive | 820930 - 821712 | 28594.4 |
| hypothetical protein | TZ53_RS27445 | Not Available | Negative | 821781 - 822446 | 25457.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
