Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium sp. YBL2 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingobium sp. YBL2 plasmid 6pYBL2-6, complete sequence.
Gene Summary
Adenine Count
3785 bp
Thymine Count
3786 bp
Guanine Count
5834 bp
Cytosine Count
5934 bp
Genome Length
19339 bp
Protein-coding Genes
16 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
7
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycosyltransferase family 4 protein | TZ53_RS03785 | Not Available | Positive | 787854 - 788990 | 39536.2 |
| metallophosphoesterase family protein | TZ53_RS03790 | Not Available | Positive | 788981 - 789697 | 26389.1 |
| atp-grasp domain-containing protein | TZ53_RS03795 | Not Available | Positive | 789694 - 790677 | 35675.7 |
| nad-dependent epimerase/dehydratase family protein | TZ53_RS03800 | Not Available | Positive | 790674 - 791552 | 30844.0 |
| outer membrane protein assembly factor bame | TZ53_RS03805 | Not Available | Negative | 791742 - 792311 | 19915.8 |
| ubiquinol-cytochrome c chaperone family protein | TZ53_RS03810 | Not Available | Positive | 792400 - 792915 | 18650.4 |
| yced family protein | TZ53_RS03815 | Not Available | Positive | 792912 - 793436 | 18861.1 |
| hypothetical protein | TZ53_RS03820 | Not Available | Positive | 793433 - 793981 | 19847.8 |
| dna polymerase iv | TZ53_RS03825 | Not Available | Positive | 794034 - 795113 | 39737.7 |
| duf1134 domain-containing protein | TZ53_RS03830 | Not Available | Negative | 795250 - 796062 | 27883.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
