Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium sp. YBL2 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingobium sp. YBL2 plasmid 6pYBL2-6, complete sequence.
Gene Summary
Adenine Count
3785 bp
Thymine Count
3786 bp
Guanine Count
5834 bp
Cytosine Count
5934 bp
Genome Length
19339 bp
Protein-coding Genes
16 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
7
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycosyltransferase family 4 protein | TZ53_RS03685 | Not Available | Negative | 763481 - 764623 | 40797.7 |
| polysaccharide lyase family 1 protein | TZ53_RS03690 | Not Available | Negative | 764644 - 765978 | 47307.7 |
| sulfotransferase family protein | TZ53_RS03695 | Not Available | Negative | 765975 - 766979 | 37140.4 |
| o-antigen ligase family protein | TZ53_RS03700 | Not Available | Positive | 767183 - 768508 | 47776.4 |
| 2og-fe(ii) oxygenase family protein | TZ53_RS03705 | Not Available | Negative | 768614 - 769591 | 35802.0 |
| gumc family protein | TZ53_RS03710 | Not Available | Positive | 769914 - 772187 | 82585.7 |
| helix-turn-helix transcriptional regulator | TZ53_RS03715 | Not Available | Positive | 772184 - 772918 | 26186.9 |
| lipopolysaccharide biosynthesis protein | TZ53_RS03720 | Not Available | Negative | 773159 - 774541 | 49229.9 |
| luxr c-terminal-related transcriptional regulator | TZ53_RS03725 | Not Available | Negative | 774646 - 775398 | 27996.5 |
| pig-l deacetylase family protein | TZ53_RS03730 | Not Available | Negative | 775742 - 776425 | 24666.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
