Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium sp. YBL2 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingobium sp. YBL2 plasmid 6pYBL2-6, complete sequence.
Gene Summary
Adenine Count
3785 bp
Thymine Count
3786 bp
Guanine Count
5834 bp
Cytosine Count
5934 bp
Genome Length
19339 bp
Protein-coding Genes
16 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
7
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| methyltransferase family protein | TZ53_RS03635 | Not Available | Negative | 750733 - 752028 | 47313.5 |
| duf1345 domain-containing protein | TZ53_RS03640 | Not Available | Negative | 752131 - 752757 | 22647.9 |
| peptidase s14 | TZ53_RS03645 | Not Available | Negative | 752799 - 753374 | 21126.7 |
| holliday junction branch migration protein ruva | TZ53_RS03650 | Not Available | Positive | 753515 - 754123 | 20474.8 |
| giy-yig nuclease family protein | TZ53_RS03655 | Not Available | Positive | 754202 - 754528 | 12539.2 |
| holliday junction branch migration dna helicase ruvb | TZ53_RS03660 | Not Available | Positive | 754587 - 755606 | 36830.5 |
| is5 family transposase | TZ53_RS25915 | Not Available | Positive | 755788 - 756550 | 28838.8 |
| calcium-binding protein | TZ53_RS03670 | Not Available | Negative | 756569 - 760306 | 125197.0 |
| hlyd family type i secretion periplasmic adaptor subunit | TZ53_RS03675 | Not Available | Negative | 760435 - 761796 | 48886.1 |
| type i secretion system permease/atpase | TZ53_RS03680 | Not Available | Negative | 761796 - 763484 | 60014.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
