Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium sp. YBL2 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingobium sp. YBL2 plasmid 6pYBL2-6, complete sequence.
Gene Summary
Adenine Count
3785 bp
Thymine Count
3786 bp
Guanine Count
5834 bp
Cytosine Count
5934 bp
Genome Length
19339 bp
Protein-coding Genes
16 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
7
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nad(+) diphosphatase | TZ53_RS03585 | Not Available | Negative | 738258 - 739190 | 34015.3 |
| a/g-specific adenine glycosylase | TZ53_RS03590 | Not Available | Negative | 739177 - 740247 | 38250.8 |
| duf721 domain-containing protein | TZ53_RS03595 | Not Available | Positive | 740274 - 740816 | 19550.9 |
| dsba family protein | TZ53_RS03600 | Not Available | Positive | 740887 - 741558 | 24087.1 |
| thioredoxin domain-containing protein | TZ53_RS03605 | Not Available | Positive | 741607 - 742341 | 25963.8 |
| chromosome segregation protein smc | TZ53_RS03610 | Not Available | Positive | 742422 - 745865 | 121748.0 |
| phospholipase d-like domain-containing protein | TZ53_RS03615 | Not Available | Negative | 745923 - 747380 | 54652.7 |
| 4-hydroxybenzoate octaprenyltransferase | TZ53_RS03620 | Not Available | Negative | 747377 - 748279 | 32144.9 |
| 16s rrna (uracil(1498)-n(3))-methyltransferase | TZ53_RS03625 | Not Available | Positive | 748401 - 749147 | 27376.9 |
| glutamate--cysteine ligase | TZ53_RS03630 | Not Available | Positive | 749263 - 750636 | 50975.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
