Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium sp. YBL2 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingobium sp. YBL2 plasmid 6pYBL2-6, complete sequence.
Gene Summary
Adenine Count
3785 bp
Thymine Count
3786 bp
Guanine Count
5834 bp
Cytosine Count
5934 bp
Genome Length
19339 bp
Protein-coding Genes
16 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
7
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tonb-dependent receptor domain-containing protein | TZ53_RS03535 | Not Available | Negative | 726380 - 729394 | 106260.0 |
| m23 family metallopeptidase | TZ53_RS03540 | Not Available | Negative | 729715 - 730551 | 29500.6 |
| duf2093 domain-containing protein | TZ53_RS03545 | Not Available | Negative | 730567 - 730776 | 7879.54 |
| exodeoxyribonuclease vii large subunit | TZ53_RS03550 | Not Available | Negative | 730808 - 732307 | 54395.7 |
| phosphoribosylamine--glycine ligase | TZ53_RS03555 | Not Available | Positive | 732315 - 733598 | 44229.8 |
| hypothetical protein | TZ53_RS03560 | Not Available | Positive | 733663 - 734190 | 18263.1 |
| acyltransferase family protein | TZ53_RS03565 | Not Available | Negative | 734195 - 735151 | 34955.5 |
| gdsl-type esterase/lipase family protein | TZ53_RS03570 | Not Available | Positive | 735269 - 735982 | 26164.9 |
| inositol monophosphatase family protein | TZ53_RS03575 | Not Available | Negative | 736079 - 736876 | 28374.8 |
| tldd/pmba family protein | TZ53_RS03580 | Not Available | Negative | 736863 - 738209 | 46626.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
