Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium sp. YBL2 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingobium sp. YBL2 plasmid 6pYBL2-6, complete sequence.
Gene Summary
Adenine Count
3785 bp
Thymine Count
3786 bp
Guanine Count
5834 bp
Cytosine Count
5934 bp
Genome Length
19339 bp
Protein-coding Genes
16 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
7
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 3-hydroxybutyryl-coa dehydrogenase | TZ53_RS03435 | Not Available | Negative | 701942 - 702820 | 30413.0 |
| ybgc/fadm family acyl-coa thioesterase | TZ53_RS03440 | Not Available | Positive | 703000 - 703470 | 17572.1 |
| protein tolq | TZ53_RS03445 | Not Available | Positive | 703467 - 704186 | 25921.3 |
| protein tolr | TZ53_RS03450 | Not Available | Positive | 704209 - 704676 | 16236.8 |
| cell envelope integrity/translocation protein tola | TZ53_RS03455 | Not Available | Positive | 704695 - 705657 | 33231.9 |
| tol-pal system beta propeller repeat protein tolb | TZ53_RS03460 | Not Available | Positive | 705690 - 707003 | 47052.3 |
| peptidoglycan-associated lipoprotein pal | TZ53_RS03465 | Not Available | Positive | 707118 - 707630 | 18067.1 |
| efflux transporter outer membrane subunit | TZ53_RS03470 | Not Available | Negative | 707765 - 709138 | 47736.3 |
| efflux rnd transporter periplasmic adaptor subunit | TZ53_RS03475 | Not Available | Negative | 709263 - 710180 | 32961.8 |
| duf1656 domain-containing protein | TZ53_RS03480 | Not Available | Negative | 710177 - 710392 | 7513.76 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
