Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium sp. YBL2 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingobium sp. YBL2 plasmid 6pYBL2-6, complete sequence.
Gene Summary
Adenine Count
3785 bp
Thymine Count
3786 bp
Guanine Count
5834 bp
Cytosine Count
5934 bp
Genome Length
19339 bp
Protein-coding Genes
16 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
7
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nucleotidyl transferase abieii/abigii toxin family protein | TZ53_RS27640 | Not Available | Negative | 62235 - 62579 | 12464.2 |
| nucleotidyl transferase abieii/abigii toxin family protein | TZ53_RS22685 | Not Available | Negative | 62518 - 63285 | 28434.6 |
| duf6088 family protein | TZ53_RS22690 | Not Available | Negative | 63278 - 63886 | 21630.0 |
| relaxase/mobilization nuclease domain-containing protein | TZ53_RS22695 | Not Available | Negative | 64066 - 65178 | 40847.6 |
| plasmid mobilization protein | TZ53_RS22700 | Not Available | Negative | 65171 - 65707 | 19411.3 |
| parb/repb/spo0j family partition protein | TZ53_RS22705 | Not Available | Negative | 65938 - 66885 | 33958.7 |
| para family protein | TZ53_RS22710 | Not Available | Negative | 66885 - 67649 | 27481.3 |
| hypothetical protein | TZ53_RS27270 | Not Available | Negative | 67662 - 67838 | 6495.51 |
| transposase | TZ53_RS26955 | Not Available | Negative | 68030 - 68125 | 3450.96 |
| is110 family transposase | TZ53_RS22715 | Not Available | Positive | 68188 - 69339 | 42723.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
