Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium sp. YBL2 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingobium sp. YBL2 plasmid 6pYBL2-6, complete sequence.
Gene Summary
Adenine Count
3785 bp
Thymine Count
3786 bp
Guanine Count
5834 bp
Cytosine Count
5934 bp
Genome Length
19339 bp
Protein-coding Genes
16 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
7
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cysteine desulfurase | TZ53_RS03340 | Not Available | Negative | 686824 - 688044 | 43224.8 |
| sufd family fe-s cluster assembly protein | TZ53_RS03345 | Not Available | Negative | 688041 - 688793 | 26385.2 |
| fe-s cluster assembly atpase sufc | TZ53_RS03350 | Not Available | Negative | 688939 - 689685 | 26696.5 |
| hypothetical protein | TZ53_RS03355 | Not Available | Negative | 689689 - 690144 | 16769.5 |
| endonuclease domain-containing protein | TZ53_RS03360 | Not Available | Negative | 690141 - 690515 | 13878.5 |
| fe-s cluster assembly protein sufb | TZ53_RS03365 | Not Available | Negative | 690635 - 692119 | 54939.6 |
| rrf2 family transcriptional regulator | TZ53_RS03370 | Not Available | Negative | 692116 - 692613 | 17017.5 |
| helix-turn-helix domain-containing protein | TZ53_RS03375 | Not Available | Negative | 692720 - 693550 | 30836.9 |
| quinone-dependent dihydroorotate dehydrogenase | TZ53_RS03380 | Not Available | Positive | 694015 - 695052 | 36482.5 |
| gamma-glutamyltransferase | TZ53_RS03385 | Not Available | Positive | 695101 - 696801 | 60510.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
