Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium sp. YBL2 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingobium sp. YBL2 plasmid 6pYBL2-6, complete sequence.
Gene Summary
Adenine Count
3785 bp
Thymine Count
3786 bp
Guanine Count
5834 bp
Cytosine Count
5934 bp
Genome Length
19339 bp
Protein-coding Genes
16 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
7
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| acetate--coa ligase | TZ53_RS03295 | Not Available | Positive | 677713 - 679656 | 70855.7 |
| cytochrome b | TZ53_RS03300 | Not Available | Positive | 679678 - 680190 | 19225.1 |
| ubih/ubif/visc/coq6 family ubiquinone biosynthesis hydroxylase | TZ53_RS03305 | Not Available | Negative | 680381 - 681589 | 42670.7 |
| branched-chain amino acid aminotransferase | TZ53_RS03310 | Not Available | Negative | 681770 - 682861 | 39264.7 |
| threonine aldolase family protein | TZ53_RS03315 | Not Available | Positive | 683014 - 684030 | 35618.1 |
| dmt family transporter | TZ53_RS03320 | Not Available | Positive | 684027 - 684917 | 31528.8 |
| hypothetical protein | TZ53_RS27085 | Not Available | Negative | 684914 - 685069 | 5675.89 |
| epimerase | TZ53_RS03325 | Not Available | Negative | 685159 - 685956 | 28749.2 |
| hesb/isca family protein | TZ53_RS03330 | Not Available | Negative | 685971 - 686333 | 12772.9 |
| suf system fe-s cluster assembly protein | TZ53_RS03335 | Not Available | Negative | 686378 - 686827 | 16271.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
