Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium sp. YBL2 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingobium sp. YBL2 plasmid 6pYBL2-6, complete sequence.
Gene Summary
Adenine Count
3785 bp
Thymine Count
3786 bp
Guanine Count
5834 bp
Cytosine Count
5934 bp
Genome Length
19339 bp
Protein-coding Genes
16 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
7
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cytochrome p450 | TZ53_RS03245 | Not Available | Negative | 665837 - 667210 | 51931.1 |
| hypothetical protein | TZ53_RS03250 | Not Available | Negative | 667207 - 668334 | 42477.5 |
| hypothetical protein | TZ53_RS03255 | Not Available | Positive | 668356 - 668649 | 11483.8 |
| 3-deoxy-8-phosphooctulonate synthase | TZ53_RS03260 | Not Available | Positive | 668655 - 669482 | 28539.5 |
| glutamate-5-semialdehyde dehydrogenase | TZ53_RS03265 | Not Available | Negative | 669584 - 670849 | 44400.1 |
| class i sam-dependent methyltransferase | TZ53_RS03270 | Not Available | Negative | 671103 - 671747 | 23779.0 |
| cdc48 family aaa atpase | TZ53_RS03275 | Not Available | Negative | 671962 - 674256 | 83736.9 |
| lysr substrate-binding domain-containing protein | TZ53_RS03280 | Not Available | Positive | 674595 - 675476 | 32739.6 |
| sensor domain-containing diguanylate cyclase | TZ53_RS03285 | Not Available | Positive | 675554 - 676717 | 42627.0 |
| glutathione s-transferase family protein | TZ53_RS03290 | Not Available | Negative | 676860 - 677531 | 25508.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
