Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium sp. YBL2 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingobium sp. YBL2 plasmid 6pYBL2-6, complete sequence.
Gene Summary
Adenine Count
3785 bp
Thymine Count
3786 bp
Guanine Count
5834 bp
Cytosine Count
5934 bp
Genome Length
19339 bp
Protein-coding Genes
16 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
7
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tonb-dependent receptor | TZ53_RS03190 | Not Available | Negative | 654754 - 656757 | 70686.0 |
| aldehyde oxidoreductase molybdenum-binding subunit paoc | TZ53_RS03195 | Not Available | Negative | 656810 - 659026 | 78313.5 |
| fad binding domain-containing protein | TZ53_RS03200 | Not Available | Negative | 659030 - 659980 | 33387.1 |
| aldehyde dehydrogenase iron-sulfur subunit paoa | TZ53_RS03205 | Not Available | Negative | 659977 - 660627 | 22962.4 |
| Trna-gly | Not Available | Not Available | Positive | 660886 - 660960 | Not Available |
| phosphatase pap2 family protein | TZ53_RS03215 | Not Available | Positive | 661274 - 661576 | 11245.4 |
| is5 family transposase | TZ53_RS25910 | Not Available | Negative | 661768 - 662483 | 26924.8 |
| phosphomethylpyrimidine synthase thic | TZ53_RS03230 | Not Available | Negative | 662603 - 664462 | 68540.4 |
| duf2065 family protein | TZ53_RS03235 | Not Available | Negative | 664474 - 664881 | 14405.4 |
| hypothetical protein | TZ53_RS03240 | Not Available | Positive | 665131 - 665427 | 11032.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
