Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium sp. YBL2 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingobium sp. YBL2 plasmid 6pYBL2-6, complete sequence.
Gene Summary
Adenine Count
3785 bp
Thymine Count
3786 bp
Guanine Count
5834 bp
Cytosine Count
5934 bp
Genome Length
19339 bp
Protein-coding Genes
16 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
7
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pyruvate kinase | TZ53_RS03140 | Not Available | Negative | 644741 - 646198 | 51987.0 |
| duf1244 domain-containing protein | TZ53_RS03145 | Not Available | Positive | 646301 - 646600 | 11015.9 |
| duf2312 domain-containing protein | TZ53_RS03150 | Not Available | Positive | 646652 - 646894 | 9248.18 |
| heavy metal-binding domain-containing protein | TZ53_RS03155 | Not Available | Positive | 646918 - 647244 | 11232.6 |
| yebc/pmpr family dna-binding transcriptional regulator | TZ53_RS03160 | Not Available | Positive | 647313 - 648056 | 26691.3 |
| crossover junction endodeoxyribonuclease ruvc | TZ53_RS03165 | Not Available | Positive | 648238 - 648729 | 16933.7 |
| phosphoenolpyruvate carboxylase | TZ53_RS03170 | Not Available | Negative | 648919 - 651618 | 97692.9 |
| atp-binding protein | TZ53_RS03175 | Not Available | Positive | 651758 - 653212 | 52078.1 |
| low molecular weight protein-tyrosine-phosphatase | TZ53_RS03180 | Not Available | Positive | 653209 - 653676 | 16842.8 |
| s1/p1 nuclease | TZ53_RS03185 | Not Available | Negative | 653809 - 654594 | 29115.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
