Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium sp. YBL2 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingobium sp. YBL2 plasmid 6pYBL2-6, complete sequence.
Gene Summary
Adenine Count
3785 bp
Thymine Count
3786 bp
Guanine Count
5834 bp
Cytosine Count
5934 bp
Genome Length
19339 bp
Protein-coding Genes
16 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
7
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| exodeoxyribonuclease vii small subunit | TZ53_RS03090 | Not Available | Negative | 636186 - 636446 | 9342.94 |
| hypothetical protein | TZ53_RS03095 | Not Available | Positive | 636614 - 636994 | 13274.0 |
| duf805 domain-containing protein | TZ53_RS03100 | Not Available | Negative | 637155 - 637583 | 16257.2 |
| phosphoribosylformylglycinamidine synthase subunit purl | TZ53_RS03105 | Not Available | Positive | 637689 - 639866 | 76285.0 |
| formate-dependent phosphoribosylglycinamide formyltransferase | TZ53_RS03110 | Not Available | Positive | 639950 - 641119 | 42359.7 |
| dienelactone hydrolase family protein | TZ53_RS03115 | Not Available | Positive | 641245 - 641964 | 25732.4 |
| m14-type cytosolic carboxypeptidase | TZ53_RS03120 | Not Available | Negative | 641982 - 643112 | 41940.5 |
| duf4136 domain-containing protein | TZ53_RS03125 | Not Available | Negative | 643109 - 643723 | 21189.3 |
| type b 50s ribosomal protein l36 | TZ53_RS03130 | Not Available | Positive | 643932 - 644057 | 5038.27 |
| had family hydrolase | TZ53_RS03135 | Not Available | Positive | 644061 - 644687 | 23480.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
