Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium sp. YBL2 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingobium sp. YBL2 plasmid 6pYBL2-6, complete sequence.
Gene Summary
Adenine Count
3785 bp
Thymine Count
3786 bp
Guanine Count
5834 bp
Cytosine Count
5934 bp
Genome Length
19339 bp
Protein-coding Genes
16 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
7
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| apc family permease | TZ53_RS02940 | Not Available | Negative | 605846 - 607228 | 47811.9 |
| aspartate--trna ligase | TZ53_RS02945 | Not Available | Negative | 607323 - 609107 | 66025.7 |
| ribonuclease d | TZ53_RS02950 | Not Available | Positive | 609236 - 610402 | 43637.5 |
| i78 family peptidase inhibitor | TZ53_RS02955 | Not Available | Positive | 610416 - 610712 | 10194.3 |
| duf1801 domain-containing protein | TZ53_RS02960 | Not Available | Positive | 610922 - 611326 | 14685.4 |
| hypothetical protein | TZ53_RS02965 | Not Available | Negative | 611384 - 612067 | 25285.8 |
| ph domain-containing protein | TZ53_RS02970 | Not Available | Negative | 612239 - 612625 | 14518.0 |
| abrb/maze/spovt family dna-binding domain-containing protein | TZ53_RS02975 | Not Available | Positive | 612728 - 612955 | 8080.97 |
| type ii toxin-antitoxin system death-on-curing family toxin | TZ53_RS02980 | Not Available | Positive | 612959 - 613348 | 13750.0 |
| translation elongation factor 4 | TZ53_RS02985 | Not Available | Negative | 613395 - 615200 | 66745.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
