Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium sp. YBL2 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingobium sp. YBL2 plasmid 6pYBL2-6, complete sequence.
Gene Summary
Adenine Count
3785 bp
Thymine Count
3786 bp
Guanine Count
5834 bp
Cytosine Count
5934 bp
Genome Length
19339 bp
Protein-coding Genes
16 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
7
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lpd7 domain-containing protein | TZ53_RS22635 | Not Available | Positive | 55526 - 56395 | 32097.4 |
| hypothetical protein | TZ53_RS22640 | Not Available | Positive | 56493 - 56690 | 7393.88 |
| nucleoside triphosphate pyrophosphohydrolase family protein | TZ53_RS22645 | Not Available | Positive | 56690 - 57868 | 43970.7 |
| uracil-dna glycosylase | TZ53_RS22650 | Not Available | Positive | 57865 - 58569 | 25677.0 |
| hypothetical protein | TZ53_RS22655 | Not Available | Negative | 58536 - 59315 | 28695.6 |
| c1 family peptidase | TZ53_RS22660 | Not Available | Negative | 59287 - 59967 | 24124.4 |
| imma/irre family metallo-endopeptidase | TZ53_RS22665 | Not Available | Negative | 59973 - 60983 | 37566.9 |
| helix-turn-helix domain-containing protein | TZ53_RS22670 | Not Available | Negative | 60986 - 61360 | 14117.6 |
| hypothetical protein | TZ53_RS22675 | Not Available | Negative | 61357 - 61695 | 12006.8 |
| hypothetical protein | TZ53_RS22680 | Not Available | Negative | 61871 - 62074 | 7909.34 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
