Mucilaginibacter oryzae str. DSM 19975

rodaerobic

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Sphingobacteriia

Order

Sphingobacteriales

Family

Sphingobacteriaceae

Genus

Mucilaginibacter

Description

Mucilaginibacter oryzae str. DSM 19975 is a Gram-negative, rod-shaped bacterium that is non-spore-forming and exhibits an aerobic mode of metabolism. With an optimal growth temperature of 29.0°C, this microbe thrives in moderate environmental conditions, suggesting a preference for habitats that do not exceed this temperature. As a member of the genus Mucilaginibacter, it is expected to play a role in organic matter decomposition within its ecological niche. The Gram-negative cell wall structure may contribute to its resilience in diverse environments, potentially influencing its interactions with other microorganisms and its ability to utilize various substrates. The aerobic nature of Mucilaginibacter oryzae indicates that it requires oxygen for growth, which further suggests its presence in oxygen-rich environments, such as soil or water bodies, where it may participate in biogeochemical cycles. Its characteristics imply that it could be involved in nutrient cycling processes or contribute to the microbial community dynamics within its habitat. Overall, Mucilaginibacter oryzae str. DSM 19975 exemplifies the complex interplay of microbial life and its adaptation to specific environmental conditions.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassSphingobacteriia
OrderSphingobacteriales
FamilySphingobacteriaceae
GenusMucilaginibacter
SpeciesMucilaginibacter oryzae
StrainDSM 19975

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
Mobilitynon-motile
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperature29
Temperature rangemesophilic
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
Sporulationnon-spore-forming
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Mucilaginibacter oryzae strain DSM 19975

Gene Summary

Adenine Count

1658412 bp

Thymine Count

1652334 bp

Guanine Count

1303482 bp

Cytosine Count

1323934 bp

Genome Length

5939202 bp

Protein-coding Genes

5046 genes

Non-Coding Genes

61 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
5-(carboxyamino)imidazole ribonucleotide synthaseLX99_03228Not AvailablePositive3798595 - 379973442532.7
four helix bundle proteinLX99_03229Not AvailablePositive3799814 - 380012211571.1
5-(carboxyamino)imidazole ribonucleotide mutaseLX99_03230Not AvailablePositive3800173 - 380066417159.9
putative transcriptional regulatorLX99_03231Not AvailableNegative3800792 - 380135520944.8
pyridoxamine 5'-phosphate oxidaseLX99_03232Not AvailablePositive3801465 - 380211224911.5
nadh-quinone oxidoreductase subunit cLX99_03233Not AvailablePositive3802109 - 380260619084.5
cupin-like domain-containing proteinLX99_03234Not AvailablePositive3803063 - 380391132922.2
nadh-quinone oxidoreductase subunit dLX99_03235Not AvailablePositive3804036 - 380523845801.7
trypsin-like peptidaseLX99_03236Not AvailableNegative3805408 - 380650540480.5
rna polymerase sigma factor (sigma-70 family)LX99_03237Not AvailableNegative3806517 - 380708622272.8

Displaying genes 3231 – 3240 of 5107 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.