Mucilaginibacter oryzae str. DSM 19975

rodaerobic

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Sphingobacteriia

Order

Sphingobacteriales

Family

Sphingobacteriaceae

Genus

Mucilaginibacter

Description

Mucilaginibacter oryzae str. DSM 19975 is a Gram-negative, rod-shaped bacterium that is non-spore-forming and exhibits an aerobic mode of metabolism. With an optimal growth temperature of 29.0°C, this microbe thrives in moderate environmental conditions, suggesting a preference for habitats that do not exceed this temperature. As a member of the genus Mucilaginibacter, it is expected to play a role in organic matter decomposition within its ecological niche. The Gram-negative cell wall structure may contribute to its resilience in diverse environments, potentially influencing its interactions with other microorganisms and its ability to utilize various substrates. The aerobic nature of Mucilaginibacter oryzae indicates that it requires oxygen for growth, which further suggests its presence in oxygen-rich environments, such as soil or water bodies, where it may participate in biogeochemical cycles. Its characteristics imply that it could be involved in nutrient cycling processes or contribute to the microbial community dynamics within its habitat. Overall, Mucilaginibacter oryzae str. DSM 19975 exemplifies the complex interplay of microbial life and its adaptation to specific environmental conditions.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassSphingobacteriia
OrderSphingobacteriales
FamilySphingobacteriaceae
GenusMucilaginibacter
SpeciesMucilaginibacter oryzae
StrainDSM 19975

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
Mobilitynon-motile
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperature29
Temperature rangemesophilic
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
Sporulationnon-spore-forming
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Mucilaginibacter oryzae strain DSM 19975

Gene Summary

Adenine Count

1658412 bp

Thymine Count

1652334 bp

Guanine Count

1303482 bp

Cytosine Count

1323934 bp

Genome Length

5939202 bp

Protein-coding Genes

5046 genes

Non-Coding Genes

61 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
transposaseLX99_01857Not AvailableNegative2192170 - 219245811150.5
winged helix-turn helix proteinLX99_01858Not AvailableNegative2192459 - 21926226140.49
dna end-binding protein kuLX99_01859Not AvailableNegative2192886 - 219365929414.2
hypothetical proteinLX99_01860Not AvailableNegative2193656 - 219392810422.2
rifampin adp-ribosylating transferaseLX99_01861Not AvailablePositive2194251 - 219496126530.3
helix-turn-helix proteinLX99_01862Not AvailableNegative2195031 - 219594834736.7
nadp-dependent 3-hydroxy acid dehydrogenase ydfgLX99_01863Not AvailableNegative2196012 - 219683929908.8
alpha-glucosidase (family gh31 glycosyl hydrolase)LX99_01864Not AvailableNegative2197062 - 2199695101249.0
putative outer membrane starch-binding proteinLX99_01865Not AvailableNegative2199930 - 220179869818.0
tonb-linked susc/raga family outer membrane proteinLX99_01866Not AvailableNegative2201809 - 2205246126101.0

Displaying genes 1861 – 1870 of 5107 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.