Mucilaginibacter oryzae str. DSM 19975

rodaerobic

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Sphingobacteriia

Order

Sphingobacteriales

Family

Sphingobacteriaceae

Genus

Mucilaginibacter

Description

Mucilaginibacter oryzae str. DSM 19975 is a Gram-negative, rod-shaped bacterium that is non-spore-forming and exhibits an aerobic mode of metabolism. With an optimal growth temperature of 29.0°C, this microbe thrives in moderate environmental conditions, suggesting a preference for habitats that do not exceed this temperature. As a member of the genus Mucilaginibacter, it is expected to play a role in organic matter decomposition within its ecological niche. The Gram-negative cell wall structure may contribute to its resilience in diverse environments, potentially influencing its interactions with other microorganisms and its ability to utilize various substrates. The aerobic nature of Mucilaginibacter oryzae indicates that it requires oxygen for growth, which further suggests its presence in oxygen-rich environments, such as soil or water bodies, where it may participate in biogeochemical cycles. Its characteristics imply that it could be involved in nutrient cycling processes or contribute to the microbial community dynamics within its habitat. Overall, Mucilaginibacter oryzae str. DSM 19975 exemplifies the complex interplay of microbial life and its adaptation to specific environmental conditions.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassSphingobacteriia
OrderSphingobacteriales
FamilySphingobacteriaceae
GenusMucilaginibacter
SpeciesMucilaginibacter oryzae
StrainDSM 19975

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
Mobilitynon-motile
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperature29
Temperature rangemesophilic
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
Sporulationnon-spore-forming
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Mucilaginibacter oryzae strain DSM 19975

Gene Summary

Adenine Count

1658412 bp

Thymine Count

1652334 bp

Guanine Count

1303482 bp

Cytosine Count

1323934 bp

Genome Length

5939202 bp

Protein-coding Genes

5046 genes

Non-Coding Genes

61 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
23s rrna (guanosine2251-2'-o)-methyltransferaseLX99_01354Not AvailablePositive1571585 - 157235528289.4
mannose-1-phosphate guanylyltransferaseLX99_01355Not AvailableNegative1572455 - 157354040557.3
atp-dependent dna helicase recqLX99_01356Not AvailablePositive1573794 - 157598982704.6
outer membrane protein ompa-like peptidoglycan-associated proteinLX99_01357Not AvailableNegative1576076 - 157797771141.6
organic radical activating enzymeLX99_01358Not AvailableNegative1578018 - 157864123391.9
hypothetical proteinLX99_01359Not AvailablePositive1578879 - 157964328678.0
nitrite reductase/ring-hydroxylating ferredoxin subunitLX99_01360Not AvailablePositive1579655 - 157998712255.8
methylenetetrahydrofolate dehydrogenase (nadp+)/methenyltetrahydrofolate cyclohydrolaseLX99_01361Not AvailableNegative1580061 - 158094232103.1
hypothetical proteinLX99_01362Not AvailableNegative1580944 - 158128813514.4
gtp-binding protein lepaLX99_01363Not AvailableNegative1581332 - 158311966702.8

Displaying genes 1361 – 1370 of 5107 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.