Mucilaginibacter oryzae str. DSM 19975

rodaerobic

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Sphingobacteriia

Order

Sphingobacteriales

Family

Sphingobacteriaceae

Genus

Mucilaginibacter

Description

Mucilaginibacter oryzae str. DSM 19975 is a Gram-negative, rod-shaped bacterium that is non-spore-forming and exhibits an aerobic mode of metabolism. With an optimal growth temperature of 29.0°C, this microbe thrives in moderate environmental conditions, suggesting a preference for habitats that do not exceed this temperature. As a member of the genus Mucilaginibacter, it is expected to play a role in organic matter decomposition within its ecological niche. The Gram-negative cell wall structure may contribute to its resilience in diverse environments, potentially influencing its interactions with other microorganisms and its ability to utilize various substrates. The aerobic nature of Mucilaginibacter oryzae indicates that it requires oxygen for growth, which further suggests its presence in oxygen-rich environments, such as soil or water bodies, where it may participate in biogeochemical cycles. Its characteristics imply that it could be involved in nutrient cycling processes or contribute to the microbial community dynamics within its habitat. Overall, Mucilaginibacter oryzae str. DSM 19975 exemplifies the complex interplay of microbial life and its adaptation to specific environmental conditions.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassSphingobacteriia
OrderSphingobacteriales
FamilySphingobacteriaceae
GenusMucilaginibacter
SpeciesMucilaginibacter oryzae
StrainDSM 19975

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
Mobilitynon-motile
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperature29
Temperature rangemesophilic
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
Sporulationnon-spore-forming
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Mucilaginibacter oryzae strain DSM 19975

Gene Summary

Adenine Count

1658412 bp

Thymine Count

1652334 bp

Guanine Count

1303482 bp

Cytosine Count

1323934 bp

Genome Length

5939202 bp

Protein-coding Genes

5046 genes

Non-Coding Genes

61 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
alpha-l-fucosidaseLX99_00092Not AvailableNegative111942 - 11329452193.9
l-rhamnose mutarotaseLX99_00093Not AvailableNegative113307 - 11363912991.7
putative abc transport system permease proteinLX99_00094Not AvailableNegative114046 - 11646690558.3
arac-like dna-binding proteinLX99_00095Not AvailableNegative116539 - 11741133296.0
outer membrane receptor protein involved in fe transportLX99_00096Not AvailableNegative117661 - 120516104389.0
Ncrna_class:otherNot AvailableNot AvailablePositive120743 - 120838Not Available
histidine kinaseLX99_00097Not AvailablePositive120785 - 12185541256.5
lyttr family two component transcriptional regulatorLX99_00098Not AvailablePositive121852 - 12260728479.8
histidine kinase/dna gyrase b/hsp90-like atpaseLX99_00099Not AvailablePositive122744 - 12416253560.6
thioredoxin reductase (nadph)LX99_00100Not AvailablePositive124213 - 12587460988.1

Displaying genes 101 – 110 of 5107 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.