Erwinia tasmaniensis Et1/99

Gram-negativeRodNon-motileFacultative anaerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Erwiniaceae

Genus

Erwinia

Description

The genus Erwinia currently contains both pathogenic and nonpathogenic bacteria. E.tasmaniensis are nonpathogenic Erwinia isolated from fruit trees; strain Et1/99, the type strain, was isolated from apple flowers in Tasmania, Australia. It consists of a 3.9 Mb circular chromosome and five plasmids. Strain Et1/99 represents an epiphytic plant bacterium related to E.amylovora and E.pyrifoliae, which are responsible for the important plant diseases fire blight and Asian pear shoot blight, respectively. Strain Et1/99 is thought to compete with these and other bacteria when occupying the same habitat during initial colonization and may represent a strategy for controlling the early steps of fire blight. Secretion systems include the hypersensitive response type III pathway present in many pathogens. Differences or missing parts within the virulence-related factors distinguish strain Et1/99 from pathogens such as Pectobacterium atrosepticum and the related Erwinia spp. Strain Et1/99 completely lacks the sorbitol operon, which may also affect its inability to invade fire blight host plants. Erwinia amylovora in contrast depends for virulence on utilization of sorbitol, the dominant carbohydrate in rosaceous plants (modified from PubMed 18462403). (EBI Integr8)

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyErwiniaceae
GenusErwinia
SpeciesErwinia tasmaniensis
StrainEt1/99

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNo
Flagellar presenceYes
Number of membranes2
Image of Erwinia tasmaniensis Et1/99
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative anaerobe
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementNot Available
SporulationNonsporulating
Energy sourceNot Available
PathogenicityNo

Genome Summary

Erwinia tasmaniensis Et1/99 plasmid pET49, complete sequence.

Gene Summary

Adenine Count

13812 bp

Thymine Count

13618 bp

Guanine Count

11179 bp

Cytosine Count

10142 bp

Genome Length

48751 bp

Protein-coding Genes

63 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

4

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
laci family dna-binding transcriptional regulatorETA_RS10575Not AvailableNegative2145759 - 214675136551.1
hypothetical proteinETA_RS10580Not AvailableNegative2147164 - 214823440103.0
ipad/sipd/sspd family type iii secretion system needle tip proteinETA_RS10585Not AvailableNegative2148360 - 214943339845.7
hypothetical proteinETA_RS19950Not AvailableNegative2149491 - 215060940628.9
type iii secretion system translocon subunit scteETA_RS10595Not AvailableNegative2150656 - 215256067885.7
sycd/lcrh family type iii secretion system chaperoneETA_RS10600Not AvailableNegative2152572 - 215311420889.8
escu/yscu/hrcu family type iii secretion system export apparatus switch proteinETA_RS10605Not AvailableNegative2153277 - 215438641917.2
type iii secretion system export apparatus subunit scttETA_RS10610Not AvailableNegative2154393 - 215516328591.9
type iii secretion system export apparatus subunit sctsETA_RS10615Not AvailableNegative2155177 - 21554319271.8
escr/yscr/hrcr family type iii secretion system export apparatus proteinETA_RS10620Not AvailableNegative2155428 - 215609624906.2

Displaying genes 2081 – 2090 of 3739 in total

Metabolites

1784 records
Metabolite IDMetabolite nameStructureCAS number
BASm00002502,5-didehydro-D-gluconateC6H7O7Chemical structure of 2,5-didehydro-D-gluconate53736-12-2
Average191.1156Da
Monoisotopic191.019177578Da
BASm00002532-oxopent-4-enoateC5H5O3Chemical structure of 2-oxopent-4-enoateNot available
Average113.093Da
Monoisotopic113.024417601Da
BASm00002603alpha,7alpha-dihydroxy-12-oxo-5beta-cholanateC24H37O5Chemical structure of 3alpha,7alpha-dihydroxy-12-oxo-5beta-cholanateNot available
Average405.556Da
Monoisotopic405.264647871Da
BASm0000274aldehydo-D-galacturonateC6H9O7Chemical structure of aldehydo-D-galacturonateNot available
Average193.132Da
Monoisotopic193.0353762Da
BASm00004283-oxoadipateC6H6O5Chemical structure of 3-oxoadipateNot available
Average158.11Da
Monoisotopic158.022620453Da
BASm0000553biphenyl-2,3-diolC12H10O2Chemical structure of biphenyl-2,3-diolNot available
Average186.2066Da
Monoisotopic186.0680796Da
BASm0000592(S)-1-phenylethanolC8H10OChemical structure of (S)-1-phenylethanolNot available
Average122.1644Da
Monoisotopic122.0731649Da
BASm0000989GlycerolC3H8O3Chemical structure of Glycerol56-81-5
Average92.0938Da
Monoisotopic92.04734412Da
BASm0001003phthalateC8H4O4Chemical structure of phthalateNot available
Average164.117Da
Monoisotopic164.0120558Da
BASm0001225dodecanoateC12H23O2Chemical structure of dodecanoateNot available
Average199.3098Da
Monoisotopic199.169805Da

Displaying 1–10 of 1784 metabolites

Health Effects

No health effects information available for this bacterium.