Erwinia tasmaniensis Et1/99

Gram-negativeRodNon-motileFacultative anaerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Erwiniaceae

Genus

Erwinia

Description

The genus Erwinia currently contains both pathogenic and nonpathogenic bacteria. E.tasmaniensis are nonpathogenic Erwinia isolated from fruit trees; strain Et1/99, the type strain, was isolated from apple flowers in Tasmania, Australia. It consists of a 3.9 Mb circular chromosome and five plasmids. Strain Et1/99 represents an epiphytic plant bacterium related to E.amylovora and E.pyrifoliae, which are responsible for the important plant diseases fire blight and Asian pear shoot blight, respectively. Strain Et1/99 is thought to compete with these and other bacteria when occupying the same habitat during initial colonization and may represent a strategy for controlling the early steps of fire blight. Secretion systems include the hypersensitive response type III pathway present in many pathogens. Differences or missing parts within the virulence-related factors distinguish strain Et1/99 from pathogens such as Pectobacterium atrosepticum and the related Erwinia spp. Strain Et1/99 completely lacks the sorbitol operon, which may also affect its inability to invade fire blight host plants. Erwinia amylovora in contrast depends for virulence on utilization of sorbitol, the dominant carbohydrate in rosaceous plants (modified from PubMed 18462403). (EBI Integr8)

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyErwiniaceae
GenusErwinia
SpeciesErwinia tasmaniensis
StrainEt1/99

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNo
Flagellar presenceYes
Number of membranes2
Image of Erwinia tasmaniensis Et1/99
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative anaerobe
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementNot Available
SporulationNonsporulating
Energy sourceNot Available
PathogenicityNo

Genome Summary

Erwinia tasmaniensis Et1/99


Gene Summary

Adenine Count

11706 bp

Thymine Count

10284 bp

Guanine Count

11715 bp

Cytosine Count

10989 bp

Genome Length

44694 bp

Protein-coding Genes

48 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

4

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
replication initiation proteinETA_RS00240Not AvailablePositive1 - 86733132.8
helix-turn-helix transcriptional regulatorETA_RS00245Not AvailablePositive967 - 145818465.6
hypothetical proteinETA_RS19545Not AvailablePositive1611 - 18238195.74
hypothetical proteinETA_RS00250Not AvailablePositive2024 - 22609057.93
hypothetical proteinETA_RS00255Not AvailablePositive2626 - 294911939.5
lytic transglycosylase domain-containing proteinETA_RS00260Not AvailablePositive3021 - 359621641.3
hypothetical proteinETA_RS00265Not AvailablePositive3593 - 388010002.5
virb3 family type iv secretion system proteinETA_RS00270Not AvailablePositive3924 - 423811375.3
virb4 family type iv secretion system proteinETA_RS00275Not AvailablePositive4235 - 660788575.7
type iv secretion system proteinETA_RS00280Not AvailablePositive6609 - 725624834.3

Displaying genes 1 – 10 of 3739 in total

Metabolites

1784 records
Metabolite IDMetabolite nameStructureCAS number
BASm00002502,5-didehydro-D-gluconateC6H7O7Chemical structure of 2,5-didehydro-D-gluconate53736-12-2
Average191.1156Da
Monoisotopic191.019177578Da
BASm00002532-oxopent-4-enoateC5H5O3Chemical structure of 2-oxopent-4-enoateNot available
Average113.093Da
Monoisotopic113.024417601Da
BASm00002603alpha,7alpha-dihydroxy-12-oxo-5beta-cholanateC24H37O5Chemical structure of 3alpha,7alpha-dihydroxy-12-oxo-5beta-cholanateNot available
Average405.556Da
Monoisotopic405.264647871Da
BASm0000274aldehydo-D-galacturonateC6H9O7Chemical structure of aldehydo-D-galacturonateNot available
Average193.132Da
Monoisotopic193.0353762Da
BASm00004283-oxoadipateC6H6O5Chemical structure of 3-oxoadipateNot available
Average158.11Da
Monoisotopic158.022620453Da
BASm0000553biphenyl-2,3-diolC12H10O2Chemical structure of biphenyl-2,3-diolNot available
Average186.2066Da
Monoisotopic186.0680796Da
BASm0000592(S)-1-phenylethanolC8H10OChemical structure of (S)-1-phenylethanolNot available
Average122.1644Da
Monoisotopic122.0731649Da
BASm0000989GlycerolC3H8O3Chemical structure of Glycerol56-81-5
Average92.0938Da
Monoisotopic92.04734412Da
BASm0001003phthalateC8H4O4Chemical structure of phthalateNot available
Average164.117Da
Monoisotopic164.0120558Da
BASm0001225dodecanoateC12H23O2Chemical structure of dodecanoateNot available
Average199.3098Da
Monoisotopic199.169805Da

Displaying 1–10 of 1784 metabolites

Health Effects

No health effects information available for this bacterium.