Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Lysobacteraceae
Genus
Xanthomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Lysobacteraceae |
| Genus | Xanthomonas |
| Species | Xanthomonas perforans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Solanum lycopersicum, Arabidopsis thaliana |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
45784 bp
Thymine Count
44168 bp
Guanine Count
65969 bp
Cytosine Count
66140 bp
Genome Length
222061 bp
Protein-coding Genes
208 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | BJD13_RS00010 | Not Available | Positive | 340 - 930 | 22079.8 |
| hypothetical protein | BJD13_RS00015 | Not Available | Positive | 927 - 1343 | 15717.0 |
| dna polymerase iii subunit beta | BJD13_RS00020 | Not Available | Positive | 1465 - 2589 | 40171.0 |
| prtrc system parb family protein | BJD13_RS00025 | Not Available | Positive | 2913 - 4673 | 64051.8 |
| prtrc system protein e | BJD13_RS00030 | Not Available | Positive | 4748 - 5290 | 18310.2 |
| prtrc system protein c | BJD13_RS00035 | Not Available | Positive | 5302 - 5697 | 14107.0 |
| hypothetical protein | BJD13_RS00040 | Not Available | Positive | 5703 - 6947 | 45100.0 |
| prtrc system protein b | BJD13_RS00045 | Not Available | Positive | 6931 - 7731 | 29441.1 |
| prtrc system protein a | BJD13_RS00050 | Not Available | Positive | 7724 - 8359 | 23556.1 |
| prtrc system thif family protein | BJD13_RS00055 | Not Available | Positive | 8356 - 9126 | 28599.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Bacterial spot of tomato | Causes | PMC6946519 |
| Bacterial spot of tomato | Causes | PMC12211302 |