Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Lysobacteraceae
Genus
Xanthomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Lysobacteraceae |
| Genus | Xanthomonas |
| Species | Xanthomonas perforans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Solanum lycopersicum, Arabidopsis thaliana |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
45784 bp
Thymine Count
44168 bp
Guanine Count
65969 bp
Cytosine Count
66140 bp
Genome Length
222061 bp
Protein-coding Genes
208 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| atp-dependent helicase | BJD13_RS00410 | Not Available | Negative | 87948 - 90260 | 85865.4 |
| protein-disulfide reductase dsbd n-terminal domain-containing protein | BJD13_RS00415 | Not Available | Positive | 90395 - 90808 | 15133.3 |
| hypothetical protein | BJD13_RS00420 | Not Available | Negative | 90861 - 91637 | 29603.6 |
| toprim domain-containing protein | BJD13_RS00425 | Not Available | Negative | 91695 - 92834 | 42563.1 |
| vwa domain-containing protein | BJD13_RS00430 | Not Available | Negative | 93100 - 95040 | 69059.9 |
| duf3150 domain-containing protein | BJD13_RS00435 | Not Available | Negative | 95050 - 96117 | 39311.2 |
| hypothetical protein | BJD13_RS00440 | Not Available | Negative | 96347 - 97012 | 24004.9 |
| aaa family atpase | BJD13_RS00445 | Not Available | Negative | 97023 - 98081 | 38455.9 |
| hypothetical protein | BJD13_RS00450 | Not Available | Negative | 98152 - 98925 | 30157.9 |
| recb family exonuclease | BJD13_RS00455 | Not Available | Negative | 99380 - 100261 | 33797.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Bacterial spot of tomato | Causes | PMC6946519 |
| Bacterial spot of tomato | Causes | PMC12211302 |
| Pith necrosis | Causes | PMC12847849 |
| Bacterial spot | Causes | PMC8597037 |
| Bacterial spot of tomato | Causes | PMC8597037 |