Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Lysobacteraceae
Genus
Xanthomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Lysobacteraceae |
| Genus | Xanthomonas |
| Species | Xanthomonas perforans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Solanum lycopersicum, Arabidopsis thaliana |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
45784 bp
Thymine Count
44168 bp
Guanine Count
65969 bp
Cytosine Count
66140 bp
Genome Length
222061 bp
Protein-coding Genes
208 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | BJD13_RS00365 | Not Available | Positive | 76698 - 77159 | 16524.6 |
| hypothetical protein | BJD13_RS00370 | Not Available | Negative | 77149 - 77439 | 10625.9 |
| duf6166 domain-containing protein | BJD13_RS00375 | Not Available | Positive | 77767 - 78090 | 11909.1 |
| hypothetical protein | BJD13_RS00380 | Not Available | Negative | 78307 - 78948 | 24201.6 |
| duf1629 domain-containing protein | BJD13_RS00385 | Not Available | Positive | 79441 - 80082 | 23664.9 |
| hypothetical protein | BJD13_RS25180 | Not Available | Positive | 80117 - 84163 | 144793.0 |
| hypothetical protein | BJD13_RS00395 | Not Available | Positive | 84204 - 84836 | 23437.3 |
| hypothetical protein | BJD13_RS24435 | Not Available | Negative | 84833 - 85339 | 18350.2 |
| hypothetical protein | BJD13_RS00400 | Not Available | Negative | 85343 - 86215 | 32455.0 |
| hypothetical protein | BJD13_RS00405 | Not Available | Negative | 86457 - 87788 | 48301.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Bacterial spot of tomato | Causes | PMC6946519 |
| Bacterial spot of tomato | Causes | PMC12211302 |
| Pith necrosis | Causes | PMC12847849 |
| Bacterial spot | Causes | PMC8597037 |
| Bacterial spot of tomato | Causes | PMC8597037 |