Xanthomonas perforans

Rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Lysobacterales

Family

Lysobacteraceae

Genus

Xanthomonas

Description

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderLysobacterales
FamilyLysobacteraceae
GenusXanthomonas
SpeciesXanthomonas perforans
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Xanthomonas perforans
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Solanum lycopersicum, Arabidopsis thaliana
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Xanthomonas perforans strain LH3 plasmid pLH3.1, complete

Gene Summary

Adenine Count

45784 bp

Thymine Count

44168 bp

Guanine Count

65969 bp

Cytosine Count

66140 bp

Genome Length

222061 bp

Protein-coding Genes

208 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
pepsy domain-containing proteinBJD13_RS00255Not AvailablePositive53754 - 5556867012.9
rna polymerase sigma factorBJD13_RS00260Not AvailablePositive55688 - 5625121532.2
fecr family proteinBJD13_RS00265Not AvailablePositive56503 - 5718925192.2
tonb-dependent receptorBJD13_RS00275Not AvailablePositive57288 - 60326107995.0
duf4198 domain-containing proteinBJD13_RS00280Not AvailablePositive60353 - 6118329097.2
efflux rnd transporter permease subunitBJD13_RS00285Not AvailableNegative61288 - 64428113292.0
efflux rnd transporter periplasmic adaptor subunitBJD13_RS25270Not AvailableNegative64425 - 6593953486.8
tolc family proteinBJD13_RS00295Not AvailableNegative65936 - 6724047247.5
hypothetical proteinBJD13_RS00300Not AvailableNegative67315 - 6771014495.8
heavy-metal-associated domain-containing proteinBJD13_RS00305Not AvailableNegative67848 - 681088806.58

Displaying genes 51 – 60 of 208 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
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Result columns

Structure search compares stored SMILES, InChI, and InChIKey text. Exact mass must match the stored database value.

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Metabolite IDMetabolite nameStructureCAS number
Average massMonoisotopic mass
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Displaying 0 metabolites

Health Effects

Health ConditionRelationReference
Bacterial spot of tomatoCausesPMC6946519
Bacterial spot of tomatoCausesPMC12211302
Pith necrosisCausesPMC12847849
Bacterial spotCausesPMC8597037
Bacterial spot of tomatoCausesPMC8597037

Displaying health effects 1 – 5 of 5 in total