Xanthomonas perforans

Rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Lysobacterales

Family

Lysobacteraceae

Genus

Xanthomonas

Description

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderLysobacterales
FamilyLysobacteraceae
GenusXanthomonas
SpeciesXanthomonas perforans
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Xanthomonas perforans
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Solanum lycopersicum, Arabidopsis thaliana
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Xanthomonas perforans strain LH3 plasmid pLH3.1, complete

Gene Summary

Adenine Count

45784 bp

Thymine Count

44168 bp

Guanine Count

65969 bp

Cytosine Count

66140 bp

Genome Length

222061 bp

Protein-coding Genes

208 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
heavy metal translocating p-type atpaseBJD13_RS00205Not AvailablePositive41343 - 4373384056.7
hypothetical proteinBJD13_RS00210Not AvailablePositive43762 - 4407611238.4
duf305 domain-containing proteinBJD13_RS00215Not AvailablePositive44151 - 4468420324.0
formimidoylglutamaseBJD13_RS00220Not AvailableNegative44681 - 4564334386.8
histidine ammonia-lyaseBJD13_RS00225Not AvailableNegative45640 - 4716953804.5
urocanate hydrataseBJD13_RS00230Not AvailableNegative47175 - 4886661429.9
histidine utilization repressorBJD13_RS00235Not AvailableNegative48874 - 4959927250.6
copl family metal-binding regulatory proteinBJD13_RS00240Not AvailablePositive49598 - 5014919925.3
tonb-dependent receptorBJD13_RS00245Not AvailablePositive50267 - 5298797600.7
pepsy domain-containing proteinBJD13_RS25260Not AvailablePositive53056 - 5374526113.7

Displaying genes 41 – 50 of 208 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
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Result columns

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Metabolite IDMetabolite nameStructureCAS number
Average massMonoisotopic mass
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Displaying 0 metabolites

Health Effects

Health ConditionRelationReference
Bacterial spot of tomatoCausesPMC6946519
Bacterial spot of tomatoCausesPMC12211302
Pith necrosisCausesPMC12847849
Bacterial spotCausesPMC8597037
Bacterial spot of tomatoCausesPMC8597037

Displaying health effects 1 – 5 of 5 in total