Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Lysobacteraceae
Genus
Xanthomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Lysobacteraceae |
| Genus | Xanthomonas |
| Species | Xanthomonas perforans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Solanum lycopersicum, Arabidopsis thaliana |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
45784 bp
Thymine Count
44168 bp
Guanine Count
65969 bp
Cytosine Count
66140 bp
Genome Length
222061 bp
Protein-coding Genes
208 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | BJD13_RS00985 | Not Available | Positive | 210249 - 211157 | 32833.6 |
| hypothetical protein | BJD13_RS00990 | Not Available | Positive | 211154 - 211822 | 23910.6 |
| recombination-associated protein rdgc | BJD13_RS00995 | Not Available | Positive | 211851 - 212738 | 32627.1 |
| thermonuclease family protein | BJD13_RS24095 | Not Available | Negative | 212798 - 213544 | 26632.6 |
| hypothetical protein | BJD13_RS01005 | Not Available | Positive | 213692 - 214717 | 37497.9 |
| hypothetical protein | BJD13_RS24505 | Not Available | Positive | 214855 - 215649 | 30234.7 |
| pdz domain-containing protein | BJD13_RS01020 | Not Available | Positive | 215679 - 216662 | 35161.6 |
| hypothetical protein | BJD13_RS01025 | Not Available | Positive | 217221 - 218372 | 42764.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Bacterial spot of tomato | Causes | PMC6946519 |
| Bacterial spot of tomato | Causes | PMC12211302 |
| Pith necrosis | Causes | PMC12847849 |
| Bacterial spot | Causes | PMC8597037 |
| Bacterial spot of tomato | Causes | PMC8597037 |