Xanthomonas perforans

Rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Lysobacterales

Family

Lysobacteraceae

Genus

Xanthomonas

Description

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderLysobacterales
FamilyLysobacteraceae
GenusXanthomonas
SpeciesXanthomonas perforans
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Xanthomonas perforans
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Solanum lycopersicum, Arabidopsis thaliana
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Xanthomonas perforans strain LH3 plasmid pLH3.1, complete

Gene Summary

Adenine Count

45784 bp

Thymine Count

44168 bp

Guanine Count

65969 bp

Cytosine Count

66140 bp

Genome Length

222061 bp

Protein-coding Genes

208 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hypothetical proteinBJD13_RS00935Not AvailableNegative201209 - 20185924316.1
dsbc family proteinBJD13_RS00940Not AvailableNegative202369 - 20312126988.4
energy transducer tonbBJD13_RS00945Not AvailablePositive203256 - 20407429526.7
hypothetical proteinBJD13_RS00950Not AvailablePositive204657 - 20524121700.0
hypothetical proteinBJD13_RS25190Not AvailablePositive205354 - 20586618297.1
duf4031 domain-containing proteinBJD13_RS00960Not AvailablePositive205863 - 20620713042.5
glucosaminidase domain-containing proteinBJD13_RS24090Not AvailablePositive206609 - 20705916714.1
hypothetical proteinBJD13_RS00970Not AvailablePositive207228 - 20787823755.2
hu family dna-binding proteinBJD13_RS00975Not AvailablePositive207891 - 20816910217.5
single-stranded-dna-specific exonuclease recjBJD13_RS00980Not AvailablePositive208316 - 21024469083.7

Displaying genes 191 – 200 of 208 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
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Result columns

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Metabolite IDMetabolite nameStructureCAS number
Average massMonoisotopic mass
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Displaying 0 metabolites

Health Effects

Health ConditionRelationReference
Bacterial spot of tomatoCausesPMC6946519
Bacterial spot of tomatoCausesPMC12211302
Pith necrosisCausesPMC12847849
Bacterial spotCausesPMC8597037
Bacterial spot of tomatoCausesPMC8597037

Displaying health effects 1 – 5 of 5 in total