Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Lysobacteraceae
Genus
Xanthomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Lysobacteraceae |
| Genus | Xanthomonas |
| Species | Xanthomonas perforans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Solanum lycopersicum, Arabidopsis thaliana |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
45784 bp
Thymine Count
44168 bp
Guanine Count
65969 bp
Cytosine Count
66140 bp
Genome Length
222061 bp
Protein-coding Genes
208 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| single-stranded dna-binding protein | BJD13_RS00060 | Not Available | Positive | 9482 - 10102 | 22552.0 |
| hypothetical protein | BJD13_RS00065 | Not Available | Positive | 10341 - 10622 | 10449.6 |
| hypothetical protein | BJD13_RS00070 | Not Available | Positive | 10755 - 11063 | 11068.3 |
| hypothetical protein | BJD13_RS25175 | Not Available | Positive | 11156 - 11296 | 4977.66 |
| hypothetical protein | BJD13_RS00075 | Not Available | Positive | 11293 - 11547 | 9061.81 |
| hypothetical protein | BJD13_RS00080 | Not Available | Positive | 11557 - 11844 | 10545.4 |
| hypothetical protein | BJD13_RS00085 | Not Available | Positive | 11928 - 12368 | 16545.2 |
| helicase-related protein | BJD13_RS00090 | Not Available | Positive | 12425 - 14392 | 72886.6 |
| tetratricopeptide repeat protein | BJD13_RS00095 | Not Available | Positive | 14493 - 15743 | 44829.5 |
| mobh family relaxase | BJD13_RS00100 | Not Available | Positive | 16091 - 18718 | 96555.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Bacterial spot of tomato | Causes | PMC6946519 |
| Bacterial spot of tomato | Causes | PMC12211302 |
| Pith necrosis | Causes | PMC12847849 |
| Bacterial spot | Causes | PMC8597037 |
| Bacterial spot of tomato | Causes | PMC8597037 |