Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Lysobacteraceae
Genus
Xanthomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Lysobacteraceae |
| Genus | Xanthomonas |
| Species | Xanthomonas perforans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Solanum lycopersicum, Arabidopsis thaliana |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
45784 bp
Thymine Count
44168 bp
Guanine Count
65969 bp
Cytosine Count
66140 bp
Genome Length
222061 bp
Protein-coding Genes
208 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | BJD13_RS24480 | Not Available | Positive | 185245 - 185748 | 17731.8 |
| hypothetical protein | BJD13_RS24485 | Not Available | Positive | 185778 - 186059 | 10640.1 |
| hypothetical protein | BJD13_RS25185 | Not Available | Positive | 187061 - 187465 | 14592.3 |
| phosphoadenosine phosphosulfate reductase family protein | BJD13_RS00850 | Not Available | Positive | 187473 - 188351 | 32737.4 |
| hypothetical protein | BJD13_RS00855 | Not Available | Positive | 188519 - 188992 | 17137.6 |
| hypothetical protein | BJD13_RS00860 | Not Available | Positive | 189016 - 189441 | 15304.2 |
| parb/repb/spo0j family partition protein | BJD13_RS00870 | Not Available | Positive | 190236 - 191111 | 31789.4 |
| hypothetical protein | BJD13_RS00875 | Not Available | Positive | 191111 - 191593 | 17613.5 |
| nucleotidyltransferase | BJD13_RS24495 | Not Available | Positive | 191684 - 191953 | 9602.63 |
| hypothetical protein | BJD13_RS24500 | Not Available | Positive | 191979 - 192152 | 6432.56 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Bacterial spot of tomato | Causes | PMC6946519 |
| Bacterial spot of tomato | Causes | PMC12211302 |
| Pith necrosis | Causes | PMC12847849 |
| Bacterial spot | Causes | PMC8597037 |
| Bacterial spot of tomato | Causes | PMC8597037 |