Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Lysobacteraceae
Genus
Xanthomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Lysobacteraceae |
| Genus | Xanthomonas |
| Species | Xanthomonas perforans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Solanum lycopersicum, Arabidopsis thaliana |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
45784 bp
Thymine Count
44168 bp
Guanine Count
65969 bp
Cytosine Count
66140 bp
Genome Length
222061 bp
Protein-coding Genes
208 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lpd1 domain-containing protein | BJD13_RS00805 | Not Available | Positive | 179049 - 180632 | 59632.3 |
| hypothetical protein | BJD13_RS24470 | Not Available | Positive | 180712 - 181125 | 15291.1 |
| hypothetical protein | BJD13_RS24475 | Not Available | Positive | 181162 - 181458 | 10641.7 |
| hypothetical protein | BJD13_RS00810 | Not Available | Positive | 181463 - 181981 | 19667.5 |
| hypothetical protein | BJD13_RS00815 | Not Available | Positive | 182031 - 182438 | 15078.8 |
| hypothetical protein | BJD13_RS00820 | Not Available | Positive | 182793 - 183083 | 10540.5 |
| hypothetical protein | BJD13_RS00825 | Not Available | Positive | 183193 - 183597 | 14370.9 |
| hypothetical protein | BJD13_RS00830 | Not Available | Positive | 183799 - 184044 | 8924.98 |
| hypothetical protein | BJD13_RS00835 | Not Available | Positive | 184105 - 184611 | 18681.9 |
| hypothetical protein | BJD13_RS00840 | Not Available | Positive | 184694 - 185173 | 17828.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Bacterial spot of tomato | Causes | PMC6946519 |
| Bacterial spot of tomato | Causes | PMC12211302 |
| Pith necrosis | Causes | PMC12847849 |
| Bacterial spot | Causes | PMC8597037 |
| Bacterial spot of tomato | Causes | PMC8597037 |