Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Lysobacteraceae
Genus
Xanthomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Lysobacteraceae |
| Genus | Xanthomonas |
| Species | Xanthomonas perforans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Solanum lycopersicum, Arabidopsis thaliana |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
45784 bp
Thymine Count
44168 bp
Guanine Count
65969 bp
Cytosine Count
66140 bp
Genome Length
222061 bp
Protein-coding Genes
208 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | BJD13_RS00750 | Not Available | Positive | 170088 - 170579 | 18433.3 |
| hypothetical protein | BJD13_RS00755 | Not Available | Negative | 170658 - 171116 | 16384.6 |
| parm/stba family protein | BJD13_RS00760 | Not Available | Negative | 171125 - 172189 | 37946.4 |
| conjugative transfer protein mobi(a/c) | BJD13_RS00765 | Not Available | Positive | 172939 - 173613 | 25545.4 |
| hypothetical protein | BJD13_RS00770 | Not Available | Positive | 173666 - 173893 | 8219.79 |
| s49 family peptidase | BJD13_RS00775 | Not Available | Positive | 173893 - 174888 | 35403.8 |
| hypothetical protein | BJD13_RS00780 | Not Available | Positive | 175378 - 175977 | 22725.1 |
| hypothetical protein | BJD13_RS00790 | Not Available | Positive | 176797 - 177792 | 36590.9 |
| hypothetical protein | BJD13_RS00795 | Not Available | Positive | 177797 - 178267 | 17978.9 |
| cro/ci family transcriptional regulator | BJD13_RS00800 | Not Available | Positive | 178411 - 178986 | 20632.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Bacterial spot of tomato | Causes | PMC6946519 |
| Bacterial spot of tomato | Causes | PMC12211302 |
| Pith necrosis | Causes | PMC12847849 |
| Bacterial spot | Causes | PMC8597037 |
| Bacterial spot of tomato | Causes | PMC8597037 |