Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Lysobacteraceae
Genus
Xanthomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Lysobacteraceae |
| Genus | Xanthomonas |
| Species | Xanthomonas perforans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Solanum lycopersicum, Arabidopsis thaliana |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
45784 bp
Thymine Count
44168 bp
Guanine Count
65969 bp
Cytosine Count
66140 bp
Genome Length
222061 bp
Protein-coding Genes
208 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | BJD13_RS00700 | Not Available | Positive | 155511 - 155696 | 6883.24 |
| conjugal transfer protein trag n-terminal domain-containing protein | BJD13_RS00705 | Not Available | Negative | 155736 - 159137 | 117114.0 |
| conjugal transfer protein trah | BJD13_RS00710 | Not Available | Negative | 159153 - 160583 | 51831.0 |
| conjugal transfer protein traf | BJD13_RS00715 | Not Available | Negative | 160583 - 161755 | 43515.4 |
| hypothetical protein | BJD13_RS00720 | Not Available | Negative | 161850 - 162581 | 27275.3 |
| hypothetical protein | BJD13_RS00725 | Not Available | Negative | 162588 - 163214 | 23349.3 |
| hypothetical protein | BJD13_RS00730 | Not Available | Negative | 163711 - 164079 | 13708.6 |
| parb/repb/spo0j family partition protein | BJD13_RS00735 | Not Available | Negative | 164139 - 165134 | 36635.9 |
| para family protein | BJD13_RS00740 | Not Available | Negative | 165131 - 165997 | 31516.9 |
| plasmid replication initiator trfa | BJD13_RS00745 | Not Available | Positive | 166215 - 167342 | 42644.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Bacterial spot of tomato | Causes | PMC6946519 |
| Bacterial spot of tomato | Causes | PMC12211302 |
| Pith necrosis | Causes | PMC12847849 |
| Bacterial spot | Causes | PMC8597037 |
| Bacterial spot of tomato | Causes | PMC8597037 |