Xanthomonas perforans

Rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Lysobacterales

Family

Lysobacteraceae

Genus

Xanthomonas

Description

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderLysobacterales
FamilyLysobacteraceae
GenusXanthomonas
SpeciesXanthomonas perforans
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Xanthomonas perforans
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Solanum lycopersicum, Arabidopsis thaliana
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Xanthomonas perforans strain LH3 plasmid pLH3.1, complete

Gene Summary

Adenine Count

45784 bp

Thymine Count

44168 bp

Guanine Count

65969 bp

Cytosine Count

66140 bp

Genome Length

222061 bp

Protein-coding Genes

208 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
s26 family signal peptidaseBJD13_RS00650Not AvailableNegative146883 - 14740419456.8
hypothetical proteinBJD13_RS00655Not AvailableNegative147401 - 14769710928.3
type iv secretion system protein tracBJD13_RS00660Not AvailableNegative147713 - 15014590152.8
traa family conjugative transfer proteinBJD13_RS00665Not AvailableNegative150164 - 15053212426.2
trav family lipoproteinBJD13_RS00670Not AvailableNegative150551 - 15124024341.2
trab/virb10 family proteinBJD13_RS00675Not AvailableNegative151313 - 15260244537.6
type-f conjugative transfer system secretin trakBJD13_RS00680Not AvailableNegative152612 - 15364936538.1
trae/trak family type iv conjugative transfer system proteinBJD13_RS00685Not AvailableNegative153666 - 15427722454.3
type iv conjugative transfer system protein tralBJD13_RS00690Not AvailableNegative154274 - 15456111252.1
hypothetical proteinBJD13_RS24465Not AvailableNegative154811 - 15531418665.1

Displaying genes 131 – 140 of 208 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
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Result columns

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Metabolite IDMetabolite nameStructureCAS number
Average massMonoisotopic mass
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Displaying 0 metabolites

Health Effects

Health ConditionRelationReference
Bacterial spot of tomatoCausesPMC6946519
Bacterial spot of tomatoCausesPMC12211302
Pith necrosisCausesPMC12847849
Bacterial spotCausesPMC8597037
Bacterial spot of tomatoCausesPMC8597037

Displaying health effects 1 – 5 of 5 in total