Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Lysobacteraceae
Genus
Xanthomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Lysobacteraceae |
| Genus | Xanthomonas |
| Species | Xanthomonas perforans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Solanum lycopersicum, Arabidopsis thaliana |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
45784 bp
Thymine Count
44168 bp
Guanine Count
65969 bp
Cytosine Count
66140 bp
Genome Length
222061 bp
Protein-coding Genes
208 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | BJD13_RS24455 | Not Available | Positive | 134216 - 135175 | 35594.0 |
| res domain-containing protein | BJD13_RS00610 | Not Available | Positive | 135162 - 135863 | 24755.8 |
| duf6283 family protein | BJD13_RS25540 | Not Available | Positive | 135860 - 136096 | 8446.8 |
| duf6283 family protein | BJD13_RS25545 | Not Available | Positive | 136117 - 136320 | 7147.74 |
| hypothetical protein | BJD13_RS25120 | Not Available | Negative | 136669 - 137238 | 20677.6 |
| hypothetical protein | BJD13_RS24460 | Not Available | Negative | 137649 - 138008 | 12839.8 |
| hypothetical protein | BJD13_RS00630 | Not Available | Negative | 138009 - 138746 | 27408.9 |
| conjugal transfer protein tran | BJD13_RS24085 | Not Available | Negative | 138751 - 144399 | 200667.0 |
| trau family protein | BJD13_RS00640 | Not Available | Negative | 144416 - 145573 | 42260.2 |
| trbc family f-type conjugative pilus assembly protein | BJD13_RS00645 | Not Available | Negative | 145570 - 146796 | 45090.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Bacterial spot of tomato | Causes | PMC6946519 |
| Bacterial spot of tomato | Causes | PMC12211302 |
| Pith necrosis | Causes | PMC12847849 |
| Bacterial spot | Causes | PMC8597037 |
| Bacterial spot of tomato | Causes | PMC8597037 |