Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Lysobacteraceae
Genus
Xanthomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Lysobacteraceae |
| Genus | Xanthomonas |
| Species | Xanthomonas perforans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Solanum lycopersicum, Arabidopsis thaliana |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
45784 bp
Thymine Count
44168 bp
Guanine Count
65969 bp
Cytosine Count
66140 bp
Genome Length
222061 bp
Protein-coding Genes
208 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | BJD13_RS00555 | Not Available | Positive | 124488 - 125186 | 24920.2 |
| duf6283 family protein | BJD13_RS25285 | Not Available | Positive | 125206 - 125673 | 16914.9 |
| hypothetical protein | BJD13_RS00565 | Not Available | Positive | 125673 - 126599 | 34289.4 |
| tyrosine-type recombinase/integrase | BJD13_RS00570 | Not Available | Positive | 126937 - 128100 | 43761.7 |
| hypothetical protein | BJD13_RS00575 | Not Available | Positive | 128168 - 128569 | 14714.3 |
| hypothetical protein | BJD13_RS00580 | Not Available | Positive | 128614 - 129657 | 38348.3 |
| hypothetical protein | BJD13_RS25290 | Not Available | Negative | 129861 - 130382 | 18875.7 |
| hypothetical protein | BJD13_RS24445 | Not Available | Positive | 130737 - 131150 | 14631.9 |
| mase1 domain-containing protein | BJD13_RS00595 | Not Available | Negative | 131112 - 132647 | 56284.7 |
| duf6602 domain-containing protein | BJD13_RS24450 | Not Available | Positive | 133006 - 133746 | 27697.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Bacterial spot of tomato | Causes | PMC6946519 |
| Bacterial spot of tomato | Causes | PMC12211302 |
| Pith necrosis | Causes | PMC12847849 |
| Bacterial spot | Causes | PMC8597037 |
| Bacterial spot of tomato | Causes | PMC8597037 |