Xanthomonas perforans

Rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Lysobacterales

Family

Lysobacteraceae

Genus

Xanthomonas

Description

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderLysobacterales
FamilyLysobacteraceae
GenusXanthomonas
SpeciesXanthomonas perforans
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Xanthomonas perforans
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Solanum lycopersicum, Arabidopsis thaliana
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Xanthomonas perforans strain LH3 plasmid pLH3.1, complete

Gene Summary

Adenine Count

45784 bp

Thymine Count

44168 bp

Guanine Count

65969 bp

Cytosine Count

66140 bp

Genome Length

222061 bp

Protein-coding Genes

208 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hypothetical proteinBJD13_RS24880Not AvailableNegative100266 - 10076618155.1
right-handed parallel beta-helix repeat-containing proteinBJD13_RS00460Not AvailablePositive101335 - 10265746814.5
hypothetical proteinBJD13_RS00465Not AvailablePositive103051 - 10408836311.1
glucosaminidase domain-containing proteinBJD13_RS00470Not AvailableNegative104076 - 10476826497.8
xope/avrpphe family type iii secretion system effectorBJD13_RS00480Not AvailableNegative105066 - 10614238763.9
dna-binding proteinBJD13_RS00485Not AvailableNegative106275 - 10733039610.3
atp-dependent nucleaseBJD13_RS00490Not AvailablePositive107602 - 10918257915.1
uvrd-helicase domain-containing proteinBJD13_RS00495Not AvailablePositive109160 - 11025740624.5
hypothetical proteinBJD13_RS00500Not AvailableNegative110273 - 1105519769.95
efflux rnd transporter permease subunitBJD13_RS00505Not AvailableNegative110548 - 113745114356.0

Displaying genes 91 – 100 of 208 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
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Result columns

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Metabolite IDMetabolite nameStructureCAS number
Average massMonoisotopic mass
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Displaying 0 metabolites

Health Effects

Health ConditionRelationReference
Bacterial spot of tomatoCausesPMC6946519
Bacterial spot of tomatoCausesPMC12211302
Pith necrosisCausesPMC12847849
Bacterial spotCausesPMC8597037
Bacterial spot of tomatoCausesPMC8597037

Displaying health effects 1 – 5 of 5 in total