Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter steynii |
| Strain | DX4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
5412 genes
Non-Coding Genes
80 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| isocitrate lyase/pep mutase family protein | BFS30_RS22695 | Not Available | Positive | 5495359 - 5496126 | 28197.0 |
| bifunctional transcriptional activator/dna repair enzyme adaa | BFS30_RS22700 | Not Available | Positive | 5496137 - 5497180 | 39550.4 |
| hypothetical protein | BFS30_RS22705 | Not Available | Positive | 5497267 - 5497467 | 7779.44 |
| mfs transporter | BFS30_RS22710 | Not Available | Negative | 5497495 - 5498679 | 43267.3 |
| helix-turn-helix domain-containing protein | BFS30_RS22715 | Not Available | Negative | 5498765 - 5499670 | 34796.7 |
| voc family protein | BFS30_RS22720 | Not Available | Positive | 5499805 - 5500215 | 15606.9 |
| m14 metallopeptidase family protein | BFS30_RS22725 | Not Available | Positive | 5500329 - 5503079 | 102368.0 |
| alpha/beta hydrolase family protein | BFS30_RS22730 | Not Available | Positive | 5503191 - 5505632 | 90870.6 |
| cpbp family intramembrane glutamic endopeptidase | BFS30_RS22735 | Not Available | Negative | 5505703 - 5506464 | 27484.7 |
| m20/m25/m40 family metallo-hydrolase | BFS30_RS22740 | Not Available | Negative | 5506896 - 5508485 | 58169.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
