Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter steynii |
| Strain | DX4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
5412 genes
Non-Coding Genes
80 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rna-binding s4 domain-containing protein | BFS30_RS01650 | Not Available | Positive | 370572 - 370778 | 7626.48 |
| 3-dehydroquinate synthase | BFS30_RS01655 | Not Available | Positive | 370778 - 371842 | 39477.1 |
| prephenate dehydratase | BFS30_RS01660 | Not Available | Positive | 372244 - 373080 | 31974.5 |
| chorismate mutase | BFS30_RS01665 | Not Available | Positive | 373130 - 374269 | 41834.5 |
| 3-phosphoshikimate 1-carboxyvinyltransferase | BFS30_RS01670 | Not Available | Positive | 374272 - 375525 | 45226.7 |
| chorismate synthase | BFS30_RS01675 | Not Available | Positive | 375550 - 376644 | 39092.6 |
| thiamine pyrophosphate-dependent enzyme | BFS30_RS01680 | Not Available | Negative | 376709 - 379132 | 89694.6 |
| duf1573 domain-containing protein | BFS30_RS01685 | Not Available | Positive | 379265 - 379657 | 14046.2 |
| pyridoxal phosphate-dependent aminotransferase | BFS30_RS01690 | Not Available | Positive | 379720 - 380922 | 44324.4 |
| Tmrna,resume consensus sequence (at 89): tataattggcgaaaataa | Not Available | Not Available | Positive | 380951 - 381315 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
