Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter duraquae |
| Strain | DSM 19034 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1553518 bp
Thymine Count
1550797 bp
Guanine Count
1084215 bp
Cytosine Count
1099733 bp
Genome Length
5288263 bp
Protein-coding Genes
4647 genes
Non-Coding Genes
60 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| beta-xylosidase | CLV32_0889 | Not Available | Positive | 985235 - 987202 | 73386.0 |
| endo-1,4-beta-xylanase | CLV32_0890 | Not Available | Positive | 987320 - 988411 | 41684.2 |
| protein of unknown function (duf303) | CLV32_0891 | Not Available | Positive | 988448 - 989299 | 30703.1 |
| glycosyl hydrolase family 43 | CLV32_0892 | Not Available | Positive | 989316 - 990269 | 35332.9 |
| enterochelin esterase-like enzyme | CLV32_0893 | Not Available | Negative | 990279 - 991121 | 31208.7 |
| beta-xylosidase | CLV32_0894 | Not Available | Negative | 991135 - 992691 | 57235.7 |
| arabinoxylan arabinofuranohydrolase | CLV32_0895 | Not Available | Positive | 992932 - 994299 | 50051.3 |
| carbohydrate binding protein with cbm6 domain | CLV32_0896 | Not Available | Positive | 994327 - 995688 | 50709.1 |
| hypothetical protein | CLV32_0897 | Not Available | Positive | 995723 - 998128 | 90157.9 |
| glycosyl hydrolase family 97 | CLV32_0898 | Not Available | Positive | 998164 - 1000095 | 71867.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
