Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter duraquae |
| Strain | DSM 19034 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1553518 bp
Thymine Count
1550797 bp
Guanine Count
1084215 bp
Cytosine Count
1099733 bp
Genome Length
5288263 bp
Protein-coding Genes
4647 genes
Non-Coding Genes
60 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tonb-linked susc/raga family outer membrane protein | CLV32_0869 | Not Available | Negative | 952785 - 955865 | 113428.0 |
| fructokinase | CLV32_0870 | Not Available | Negative | 955894 - 956784 | 32893.0 |
| sugar porter (sp) family mfs transporter | CLV32_0871 | Not Available | Negative | 956814 - 958145 | 48656.4 |
| monosaccharide abc transporter substrate-binding protein (cut2 family) | CLV32_0872 | Not Available | Positive | 958520 - 961243 | 102083.0 |
| alpha-l-fucosidase 2 | CLV32_0873 | Not Available | Negative | 961266 - 963797 | 93701.2 |
| l-ribulokinase | CLV32_0874 | Not Available | Positive | 964078 - 965778 | 62350.5 |
| l-ribulose 5-phosphate 4-epimerase | CLV32_0875 | Not Available | Positive | 965775 - 966476 | 25825.7 |
| l-arabinose isomerase | CLV32_0876 | Not Available | Positive | 966513 - 968003 | 55356.3 |
| aldose 1-epimerase | CLV32_0877 | Not Available | Positive | 968067 - 969218 | 41459.0 |
| adp-ribose pyrophosphatase yjhb (nudix family) | CLV32_0878 | Not Available | Negative | 969318 - 970010 | 26458.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
